IL_7UG6_023

3D structure

PDB id

7UG6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CC*GAG

Length

5 nucleotides

Bulged bases

7UG6|1|1|A|780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UG6_023 not in the Motif Atlas

Geometric match to IL_7A0S_012

Geometric discrepancy: 0.2856

The information below is about IL_7A0S_012

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

130

Unit IDs

7UG6|1|1|C|752
7UG6|1|1|C|753
*
7UG6|1|1|G|779
7UG6|1|1|A|780
7UG6|1|1|G|781

Current chains

Chain 1

25S rRNA

Nearby chains

Chain Q

60S ribosomal protein L18-A

Chain a

60S ribosomal protein L28