3D structure

PDB id
7UG6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GCUCAUCAG*CUCAAGC
Length
16 nucleotides
Bulged bases
7UG6|1|1|U|1191, 7UG6|1|1|C|1192, 7UG6|1|1|C|1316, 7UG6|1|1|A|1318
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7UG6|1|1|G|1186
7UG6|1|1|C|1187
7UG6|1|1|U|1188
7UG6|1|1|C|1189
7UG6|1|1|A|1190
7UG6|1|1|U|1191
7UG6|1|1|C|1192
7UG6|1|1|A|1193
7UG6|1|1|G|1194
*
7UG6|1|1|C|1314
7UG6|1|1|U|1315
7UG6|1|1|C|1316
7UG6|1|1|A|1317
7UG6|1|1|A|1318
7UG6|1|1|G|1319
7UG6|1|1|C|1320

Current chains

Chain 1
25S rRNA

Nearby chains

Chain H
60S ribosomal protein L9-A
Chain M
60S ribosomal protein L14-A
Chain O
60S ribosomal protein L16-A
Chain S
60S ribosomal protein L20-A
Chain r
Ribosome biogenesis protein NSA2
Chain s
Nuclear GTP-binding protein NUG1

Coloring options:

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