IL_7UG7_055

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UG7_055 not in the Motif Atlas

Homologous match to IL_5J7L_057

Geometric discrepancy: 0.1262

The information below is about IL_5J7L_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.2

Basepair signature

cWW-tSH-L-R-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

7UG7|1|16|C|1303
7UG7|1|16|G|1304
7UG7|1|16|G|1305
7UG7|1|16|A|1306
7UG7|1|16|U|1307
7UG7|1|16|U|1308
*
7UG7|1|16|A|1329
7UG7|1|16|U|1330
7UG7|1|16|G|1331
7UG7|1|16|A|1332
7UG7|1|16|A|1333
7UG7|1|16|G|1334

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SM

30S ribosomal protein S13