IL_7UG7_072

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UG7_072 not in the Motif Atlas

Geometric match to IL_5J7L_253

Geometric discrepancy: 0.3734

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7UG7|1|23|C|274
7UG7|1|23|C|275
7UG7|1|23|U|276
7UG7|1|23|G|277
7UG7|1|23|A|278
7UG7|1|23|A|279
7UG7|1|23|U|280
7UG7|1|23|C|281
*
7UG7|1|23|G|359
7UG7|1|23|U|360
7UG7|1|23|G|361
7UG7|1|23|A|362
7UG7|1|23|G|363

Current chains

Chain 23

23S rRNA

Nearby chains