3D structure

PDB id
7UG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
Experimental method
ELECTRON MICROSCOPY
Resolution
2.58 Å

Loop

Sequence
GAAC*GAGUGAAAAAGAAC
Length
18 nucleotides
Bulged bases
7UG7|1|23|A|504, 7UG7|1|23|A|508
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7UG7_074 not in the Motif Atlas
Geometric match to IL_5J7L_255
Geometric discrepancy: 0.0723
The information below is about IL_5J7L_255
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_81516.2
Basepair signature
cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
Number of instances in this motif group
6

Unit IDs

7UG7|1|23|G|481
7UG7|1|23|A|482
7UG7|1|23|A|483
7UG7|1|23|C|484
*
7UG7|1|23|G|496
7UG7|1|23|A|497
7UG7|1|23|G|498
7UG7|1|23|U|499
7UG7|1|23|G|500
7UG7|1|23|A|501
7UG7|1|23|A|502
7UG7|1|23|A|503
7UG7|1|23|A|504
7UG7|1|23|A|505
7UG7|1|23|G|506
7UG7|1|23|A|507
7UG7|1|23|A|508
7UG7|1|23|C|509

Current chains

Chain 23
23S rRNA

Nearby chains

Chain LV
50S ribosomal protein L22
Chain LX
50S ribosomal protein L24

Coloring options:


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