IL_7UG7_106

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GUAAG*UAUC

Length

9 nucleotides

Bulged bases

7UG7|1|23|A|1205

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UG7_106 not in the Motif Atlas

Geometric match to IL_5J7L_287

Geometric discrepancy: 0.0651

The information below is about IL_5J7L_287

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_91920.1

Basepair signature

cWW-cWW-tHH-cWW

Number of instances in this motif group

1

Unit IDs

7UG7|1|23|G|1202
7UG7|1|23|U|1203
7UG7|1|23|A|1204
7UG7|1|23|A|1205
7UG7|1|23|G|1206
*
7UG7|1|23|U|1240
7UG7|1|23|A|1241
7UG7|1|23|U|1242
7UG7|1|23|C|1243

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LD

50S ribosomal protein L4

Chain LO

50S ribosomal protein L15