IL_7UG7_134
3D structure
- PDB id
- 7UG7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.58 Å
Loop
- Sequence
- UG*UAAA
- Length
- 6 nucleotides
- Bulged bases
- 7UG7|1|23|A|1899, 7UG7|1|23|A|1900
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UG7_134 not in the Motif Atlas
- Geometric match to IL_5J7L_315
- Geometric discrepancy: 0.0526
- The information below is about IL_5J7L_315
- Detailed Annotation
- Major groove intercalation
- Broad Annotation
- Major groove intercalation
- Motif group
- IL_82107.5
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 31
Unit IDs
7UG7|1|23|U|1841
7UG7|1|23|G|1842
*
7UG7|1|23|U|1898
7UG7|1|23|A|1899
7UG7|1|23|A|1900
7UG7|1|23|A|1901
Current chains
- Chain 23
- 23S rRNA
Nearby chains
- Chain LB
- 50S ribosomal protein L2
Coloring options: