3D structure

PDB id
7UG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
Experimental method
ELECTRON MICROSCOPY
Resolution
2.58 Å

Loop

Sequence
ACG*CUAU
Length
7 nucleotides
Bulged bases
7UG7|1|23|C|2055, 7UG7|1|23|U|2613, 7UG7|1|23|A|2614
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7UG7_140 not in the Motif Atlas
Geometric match to IL_5J7L_321
Geometric discrepancy: 0.1066
The information below is about IL_5J7L_321
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_83389.2
Basepair signature
cWW-cWW
Number of instances in this motif group
5

Unit IDs

7UG7|1|23|A|2054
7UG7|1|23|C|2055
7UG7|1|23|G|2056
*
7UG7|1|23|C|2612
7UG7|1|23|U|2613
7UG7|1|23|A|2614
7UG7|1|23|U|2615

Current chains

Chain 23
23S rRNA

Nearby chains

Chain LC
50S ribosomal protein L3
Chain LV
50S ribosomal protein L22
Chain Lf
50S ribosomal protein L32

Coloring options:


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