3D structure

PDB id
7UG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
Experimental method
ELECTRON MICROSCOPY
Resolution
2.58 Å

Loop

Sequence
GU(G7M)A*UCC
Length
7 nucleotides
Bulged bases
7UG7|1|23|U|2068
QA status
Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7UG7_142 not in the Motif Atlas
Geometric match to IL_5C5W_002
Geometric discrepancy: 0.1344
The information below is about IL_5C5W_002
Detailed Annotation
Isolated non-canonical cWW pair
Broad Annotation
No text annotation
Motif group
IL_87907.2
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
179

Unit IDs

7UG7|1|23|G|2067
7UG7|1|23|U|2068
7UG7|1|23|G7M|2069
7UG7|1|23|A|2070
*
7UG7|1|23|U|2441
7UG7|1|23|C|2442
7UG7|1|23|C|2443

Current chains

Chain 23
23S rRNA

Nearby chains

Chain LD
50S ribosomal protein L4
Chain LO
50S ribosomal protein L15

Coloring options:


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