IL_7UG7_143

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

AA*UACU

Length

6 nucleotides

Bulged bases

7UG7|1|23|A|2439

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UG7_143 not in the Motif Atlas

Geometric match to IL_5TBW_094

Geometric discrepancy: 0.0652

The information below is about IL_5TBW_094

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_18604.1

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

46

Unit IDs

7UG7|1|23|A|2070
7UG7|1|23|A|2071
*
7UG7|1|23|U|2438
7UG7|1|23|A|2439
7UG7|1|23|C|2440
7UG7|1|23|U|2441

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LB

50S ribosomal protein L2

Chain Pt

Transfer RNA; tRNA