IL_7UG7_155

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

AGG*CA(OMC)CU

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UG7_155 not in the Motif Atlas

Homologous match to IL_5J7L_335

Geometric discrepancy: 0.0672

The information below is about IL_5J7L_335

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UG7|1|23|A|2453
7UG7|1|23|G|2454
7UG7|1|23|G|2455
*
7UG7|1|23|C|2496
7UG7|1|23|A|2497
7UG7|1|23|OMC|2498
7UG7|1|23|C|2499
7UG7|1|23|U|2500

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LC

50S ribosomal protein L3

Chain LP

50S ribosomal protein L16

Chain Pt

Transfer RNA; tRNA