IL_7UNR_001
3D structure
- PDB id
- 7UNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UNR_001 not in the Motif Atlas
- Geometric match to IL_5J7L_245
- Geometric discrepancy: 0.0955
- The information below is about IL_5J7L_245
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_04021.2
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
7UNR|1|A|G|24
7UNR|1|A|U|25
7UNR|1|A|G|26
7UNR|1|A|G|27
7UNR|1|A|A|28
7UNR|1|A|U|29
7UNR|1|A|G|30
*
7UNR|1|A|C|501
7UNR|1|A|U|502
7UNR|1|A|G|503
7UNR|1|A|A|504
7UNR|1|A|A|505
7UNR|1|A|A|506
7UNR|1|A|C|507
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain S
- 50S ribosomal protein L20
- Chain U
- 50S ribosomal protein L22
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