3D structure

PDB id
7UNR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
ACG*CUAU
Length
7 nucleotides
Bulged bases
7UNR|1|A|C|2042, 7UNR|1|A|U|2600, 7UNR|1|A|A|2601
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7UNR_078 not in the Motif Atlas
Geometric match to IL_5J7L_321
Geometric discrepancy: 0.0881
The information below is about IL_5J7L_321
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_83389.2
Basepair signature
cWW-cWW
Number of instances in this motif group
5

Unit IDs

7UNR|1|A|A|2041
7UNR|1|A|C|2042
7UNR|1|A|G|2043
*
7UNR|1|A|C|2599
7UNR|1|A|U|2600
7UNR|1|A|A|2601
7UNR|1|A|U|2602

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 4
50S ribosomal protein L32
Chain D
50S ribosomal protein L3
Chain U
50S ribosomal protein L22

Coloring options:


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