IL_7UNR_110
3D structure
- PDB id
- 7UNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGUG*CUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UNR_110 not in the Motif Atlas
- Geometric match to IL_5J7L_353
- Geometric discrepancy: 0.0862
- The information below is about IL_5J7L_353
- Detailed Annotation
- Multiple bulged bases with non-canonical cWW
- Broad Annotation
- Multiple bulged bases with non-canonical cWW
- Motif group
- IL_64231.5
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
7UNR|1|A|G|2830
7UNR|1|A|G|2831
7UNR|1|A|U|2832
7UNR|1|A|G|2833
*
7UNR|1|A|C|2857
7UNR|1|A|U|2858
7UNR|1|A|A|2859
7UNR|1|A|A|2860
7UNR|1|A|C|2861
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain P
- 50S ribosomal protein L17
- Chain R
- 50S ribosomal protein L19
Coloring options: