IL_7UNW_024

3D structure

PDB id

7UNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GGA*UAAUC

Length

8 nucleotides

Bulged bases

7UNW|1|A|G|766, 7UNW|1|A|A|778, 7UNW|1|A|A|779

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UNW_024 not in the Motif Atlas

Geometric match to IL_7RQB_023

Geometric discrepancy: 0.0796

The information below is about IL_7RQB_023

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_90991.6

Basepair signature

cWW-cWW

Number of instances in this motif group

7

Unit IDs

7UNW|1|A|G|765
7UNW|1|A|G|766
7UNW|1|A|A|767
*
7UNW|1|A|U|777
7UNW|1|A|A|778
7UNW|1|A|A|779
7UNW|1|A|U|780
7UNW|1|A|C|781

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 6

50S ribosomal protein L34

Chain C

50S ribosomal protein L2

Chain U

50S ribosomal protein L22