IL_7UNW_047
3D structure
- PDB id
- 7UNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- AUGAGUAA*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UNW_047 not in the Motif Atlas
- Geometric match to IL_5J7L_289
- Geometric discrepancy: 0.0759
- The information below is about IL_5J7L_289
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7UNW|1|A|A|1249
7UNW|1|A|U|1250
7UNW|1|A|G|1251
7UNW|1|A|A|1252
7UNW|1|A|G|1253
7UNW|1|A|U|1254
7UNW|1|A|A|1255
7UNW|1|A|A|1256
*
7UNW|1|A|U|1998
7UNW|1|A|G|1999
7UNW|1|A|A|2000
7UNW|1|A|A|2001
7UNW|1|A|A|2002
7UNW|1|A|U|2003
7UNW|1|A|U|2004
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain E
- 50S ribosomal protein L4
- Chain U
- 50S ribosomal protein L22
Coloring options: