IL_7UNW_074

3D structure

PDB id

7UNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

UUAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UNW_074 not in the Motif Atlas

Geometric match to IL_5J7L_317

Geometric discrepancy: 0.1175

The information below is about IL_5J7L_317

Detailed Annotation

UAA/GAN variation

Broad Annotation

No text annotation

Motif group

IL_77691.5

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

7UNW|1|A|U|1851
7UNW|1|A|U|1852
7UNW|1|A|A|1853
7UNW|1|A|G|1854
*
7UNW|1|A|C|1861
7UNW|1|A|G|1862
7UNW|1|A|A|1863
7UNW|1|A|A|1864
7UNW|1|A|G|1865

Current chains

Chain A

23S Ribosomal RNA

Nearby chains