3D structure

PDB id
7UNW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
UUAG*CGAAG
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7UNW_074 not in the Motif Atlas
Geometric match to IL_5J7L_317
Geometric discrepancy: 0.1175
The information below is about IL_5J7L_317
Detailed Annotation
UAA/GAN variation
Broad Annotation
No text annotation
Motif group
IL_77691.5
Basepair signature
cWW-tSH-L-R-L-cWW
Number of instances in this motif group
7

Unit IDs

7UNW|1|A|U|1851
7UNW|1|A|U|1852
7UNW|1|A|A|1853
7UNW|1|A|G|1854
*
7UNW|1|A|C|1861
7UNW|1|A|G|1862
7UNW|1|A|A|1863
7UNW|1|A|A|1864
7UNW|1|A|G|1865

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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