IL_7UNW_110

3D structure

PDB id

7UNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UNW_110 not in the Motif Atlas

Geometric match to IL_5J7L_354

Geometric discrepancy: 0.0679

The information below is about IL_5J7L_354

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_70411.2

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

7

Unit IDs

7UNW|1|A|U|2834
7UNW|1|A|G|2835
7UNW|1|A|U|2836
7UNW|1|A|A|2837
7UNW|1|A|A|2838
7UNW|1|A|G|2839
*
7UNW|1|A|U|2852
7UNW|1|A|U|2853
7UNW|1|A|G|2854
7UNW|1|A|A|2855
7UNW|1|A|G|2856

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L17

Chain R

50S ribosomal protein L19