IL_7UNW_179

3D structure

PDB id

7UNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

UAG*CG

Length

5 nucleotides

Bulged bases

7UNW|1|a|A|1435

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UNW_179 not in the Motif Atlas

Homologous match to IL_5J7L_064

Geometric discrepancy: 0.5349

The information below is about IL_5J7L_064

Detailed Annotation

Single bulged A

Broad Annotation

Single bulged A

Motif group

IL_31462.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

130

Unit IDs

7UNW|1|a|U|1434
7UNW|1|a|A|1435
7UNW|1|a|G|1436
*
7UNW|1|a|C|1454
7UNW|1|a|G|1455

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain R

50S ribosomal protein L19

Chain t

30S ribosomal protein S20