IL_7UNW_185

3D structure

PDB id

7UNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CUUGUGUAGGAUAGGUGGGAGG*CCAUCCUUGAAAUACCACCCUGG

Length

45 nucleotides

Bulged bases

7UNW|1|A|U|2095, 7UNW|1|A|U|2098, 7UNW|1|A|U|2105, 7UNW|1|A|C|2148, 7UNW|1|A|C|2151, 7UNW|1|A|A|2156

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UNW|1|A|C|2094
7UNW|1|A|U|2095
7UNW|1|A|U|2096
7UNW|1|A|G|2097
7UNW|1|A|U|2098
7UNW|1|A|G|2099
7UNW|1|A|U|2100
7UNW|1|A|A|2101
7UNW|1|A|G|2102
7UNW|1|A|G|2103
7UNW|1|A|A|2104
7UNW|1|A|U|2105
7UNW|1|A|A|2106
7UNW|1|A|G|2107
7UNW|1|A|G|2108
7UNW|1|A|U|2109
7UNW|1|A|G|2110
7UNW|1|A|G|2111
7UNW|1|A|G|2112
7UNW|1|A|A|2113
7UNW|1|A|G|2114
7UNW|1|A|G|2115
*
7UNW|1|A|C|2147
7UNW|1|A|C|2148
7UNW|1|A|A|2149
7UNW|1|A|U|2150
7UNW|1|A|C|2151
7UNW|1|A|C|2152
7UNW|1|A|U|2153
7UNW|1|A|U|2154
7UNW|1|A|G|2155
7UNW|1|A|A|2156
7UNW|1|A|A|2157
7UNW|1|A|A|2158
7UNW|1|A|U|2159
7UNW|1|A|A|2160
7UNW|1|A|C|2161
7UNW|1|A|C|2162
7UNW|1|A|A|2163
7UNW|1|A|C|2164
7UNW|1|A|C|2165
7UNW|1|A|C|2166
7UNW|1|A|U|2167
7UNW|1|A|G|2168
7UNW|1|A|G|2169

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain k

30S ribosomal protein S11