IL_7UOO_026

3D structure

PDB id

7UOO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.34 Å

Loop

Sequence

CC(OMG)A(A2M)AG*CUAGUAGCUG

Length

17 nucleotides

Bulged bases

7UOO|1|1|A|933

QA status

Modified nucleotides: OMG, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UOO|1|1|C|803
7UOO|1|1|C|804
7UOO|1|1|OMG|805
7UOO|1|1|A|806
7UOO|1|1|A2M|807
7UOO|1|1|A|808
7UOO|1|1|G|809
*
7UOO|1|1|C|931
7UOO|1|1|U|932
7UOO|1|1|A|933
7UOO|1|1|G|934
7UOO|1|1|U|935
7UOO|1|1|A|936
7UOO|1|1|G|937
7UOO|1|1|C|938
7UOO|1|1|U|939
7UOO|1|1|G|940

Current chains

Chain 1

25S rRNA

Nearby chains

Chain C

60S ribosomal protein L4-A

Chain L

60S ribosomal protein L13-A

Chain j

60S ribosomal protein L37-A

Chain m

Nucleolar GTP-binding protein 2