IL_7UOO_080

3D structure

PDB id

7UOO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.34 Å

Loop

Sequence

CUGAAUG*CGCG

Length

11 nucleotides

Bulged bases

7UOO|1|1|A|2207, 7UOO|1|1|A|2208, 7UOO|1|1|U|2209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UOO|1|1|C|2204
7UOO|1|1|U|2205
7UOO|1|1|G|2206
7UOO|1|1|A|2207
7UOO|1|1|A|2208
7UOO|1|1|U|2209
7UOO|1|1|G|2210
*
7UOO|1|1|C|2235
7UOO|1|1|G|2236
7UOO|1|1|C|2237
7UOO|1|1|G|2238

Current chains

Chain 1

25S rRNA

Nearby chains

Chain m

Nucleolar GTP-binding protein 2