IL_7UOO_086
3D structure
- PDB id
- 7UOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.34 Å
Loop
- Sequence
- CCC*G(OMG)G
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UOO_086 not in the Motif Atlas
- Geometric match to IL_5MWI_006
- Geometric discrepancy: 0.1447
- The information below is about IL_5MWI_006
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 259
Unit IDs
7UOO|1|1|C|2405
7UOO|1|1|C|2406
7UOO|1|1|C|2407
*
7UOO|1|1|G|2814
7UOO|1|1|OMG|2815
7UOO|1|1|G|2816
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain b
- Nucleolar GTP-binding protein 1
- Chain m
- Nucleolar GTP-binding protein 2
- Chain r
- Ribosome biogenesis protein NSA2
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