IL_7UOO_092
3D structure
- PDB id
- 7UOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.34 Å
Loop
- Sequence
- GCAC*GUCC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UOO_092 not in the Motif Atlas
- Geometric match to IL_3CUL_002
- Geometric discrepancy: 0.3054
- The information below is about IL_3CUL_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_30621.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 66
Unit IDs
7UOO|1|1|G|2624
7UOO|1|1|C|2625
7UOO|1|1|A|2626
7UOO|1|1|C|2627
*
7UOO|1|1|G|2651
7UOO|1|1|U|2652
7UOO|1|1|C|2653
7UOO|1|1|C|2654
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain J
- 60S ribosomal protein L11-A
- Chain T
- 60S ribosomal protein L21-A
- Chain v
- Ribosome production factor 2 homolog
- Chain w
- Ribosome biogenesis regulatory protein
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