IL_7UQB_152

3D structure

PDB id

7UQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strain with AlF4

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

UCAAAGUG*CAACCAAG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UQB|1|1|U|2211
7UQB|1|1|C|2212
7UQB|1|1|A|2213
7UQB|1|1|A|2214
7UQB|1|1|A|2215
7UQB|1|1|G|2216
7UQB|1|1|U|2217
7UQB|1|1|G|2218
*
7UQB|1|1|C|2227
7UQB|1|1|A|2228
7UQB|1|1|A|2229
7UQB|1|1|C|2230
7UQB|1|1|C|2231
7UQB|1|1|A|2232
7UQB|1|1|A|2233
7UQB|1|1|G|2234

Current chains

Chain 1

25S rRNA

Nearby chains

Chain i

60S ribosomal protein L36-A