IL_7UQZ_059
3D structure
- PDB id
- 7UQZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.44 Å
Loop
- Sequence
- GG*UUUC
- Length
- 6 nucleotides
- Bulged bases
- 7UQZ|1|1|U|1820, 7UQZ|1|1|U|1821
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UQZ_059 not in the Motif Atlas
- Geometric match to IL_4YAZ_007
- Geometric discrepancy: 0.1516
- The information below is about IL_4YAZ_007
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- Multiple bulged bases
- Motif group
- IL_82107.4
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 30
Unit IDs
7UQZ|1|1|G|1623
7UQZ|1|1|G|1624
*
7UQZ|1|1|U|1819
7UQZ|1|1|U|1820
7UQZ|1|1|U|1821
7UQZ|1|1|C|1822
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain g
- 60S ribosomal protein L34-A
- Chain k
- 60S ribosomal protein L38
- Chain n
- Pescadillo homolog
Coloring options: