3D structure

PDB id
7UQZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain
Experimental method
ELECTRON MICROSCOPY
Resolution
2.44 Å

Loop

Sequence
GAAUAA(OMU)G*C(OMU)A(PSU)C
Length
13 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: OMU, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7UQZ|1|1|G|1882
7UQZ|1|1|A|1883
7UQZ|1|1|A|1884
7UQZ|1|1|U|1885
7UQZ|1|1|A|1886
7UQZ|1|1|A|1887
7UQZ|1|1|OMU|1888
7UQZ|1|1|G|1889
*
7UQZ|1|1|C|2346
7UQZ|1|1|OMU|2347
7UQZ|1|1|A|2348
7UQZ|1|1|PSU|2349
7UQZ|1|1|C|2350

Current chains

Chain 1
25S rRNA

Nearby chains

Chain B
60S ribosomal protein L3
Chain P
60S ribosomal protein L17-A
Chain d
60S ribosomal protein L31-A

Coloring options:

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