IL_7UQZ_070

3D structure

PDB id

7UQZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.44 Å

Loop

Sequence

UAAG*CC(PSU)A

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UQZ|1|1|U|1894
7UQZ|1|1|A|1895
7UQZ|1|1|A|1896
7UQZ|1|1|G|1897
*
7UQZ|1|1|C|2338
7UQZ|1|1|C|2339
7UQZ|1|1|PSU|2340
7UQZ|1|1|A|2341

Current chains

Chain 1

25S rRNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain I

Bud site selection protein 20

Chain V

60S ribosomal protein L23-A

Chain u

Ribosome biogenesis protein RLP24