IL_7UQZ_144
3D structure
- PDB id
- 7UQZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.44 Å
Loop
- Sequence
- AAG*CC(PSU)
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UQZ_144 not in the Motif Atlas
- Homologous match to IL_8C3A_081
- Geometric discrepancy: 0.3261
- The information below is about IL_8C3A_081
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_54997.8
- Basepair signature
- cWW-tWW-cWW
- Number of instances in this motif group
- 8
Unit IDs
7UQZ|1|1|A|1895
7UQZ|1|1|A|1896
7UQZ|1|1|G|1897
*
7UQZ|1|1|C|2338
7UQZ|1|1|C|2339
7UQZ|1|1|PSU|2340
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain I
- Bud site selection protein 20
- Chain V
- 60S ribosomal protein L23-A
- Chain u
- Ribosome biogenesis protein RLP24
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