IL_7UVV_041

3D structure

PDB id

7UVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GUAAG*UAUC

Length

9 nucleotides

Bulged bases

7UVV|1|A|A|1200

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UVV_041 not in the Motif Atlas

Homologous match to IL_5J7L_287

Geometric discrepancy: 0.0947

The information below is about IL_5J7L_287

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_91920.1

Basepair signature

cWW-cWW-tHH-cWW

Number of instances in this motif group

1

Unit IDs

7UVV|1|A|G|1197
7UVV|1|A|U|1198
7UVV|1|A|A|1199
7UVV|1|A|A|1200
7UVV|1|A|G|1201
*
7UVV|1|A|U|1235
7UVV|1|A|A|1236
7UVV|1|A|U|1237
7UVV|1|A|C|1238

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain K

50S ribosomal protein L15