IL_7UVV_062

3D structure

PDB id

7UVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

7UVV|1|A|G|1697

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UVV_062 not in the Motif Atlas

Geometric match to IL_5J7L_308

Geometric discrepancy: 0.0965

The information below is about IL_5J7L_308

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_47346.2

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

7UVV|1|A|C|1684
7UVV|1|A|G|1685
7UVV|1|A|U|1686
7UVV|1|A|A|1687
7UVV|1|A|A|1688
7UVV|1|A|C|1689
*
7UVV|1|A|G|1694
7UVV|1|A|G|1695
7UVV|1|A|A|1696
7UVV|1|A|G|1697
7UVV|1|A|A|1698
7UVV|1|A|A|1699
7UVV|1|A|G|1700

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain a

Small subunit ribosomal RNA; SSU rRNA