IL_7UVW_058

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

GUA*UGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UVW_058 not in the Motif Atlas

Geometric match to IL_4P43_001

Geometric discrepancy: 0.2739

The information below is about IL_4P43_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

7UVW|1|A|G|1528
7UVW|1|A|U|1529
7UVW|1|A|A|1530
*
7UVW|1|A|U|1535
7UVW|1|A|G|1536
7UVW|1|A|C|1537

Current chains

Chain A

23s ribosomal RNA

Nearby chains