IL_7UVW_100

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

GAUAAC*GGAAGC

Length

12 nucleotides

Bulged bases

7UVW|1|A|A|2761

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UVW_100 not in the Motif Atlas

Homologous match to IL_7RQB_107

Geometric discrepancy: 0.0841

The information below is about IL_7RQB_107

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_49767.5

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

5

Unit IDs

7UVW|1|A|G|2733
7UVW|1|A|A|2734
7UVW|1|A|U|2735
7UVW|1|A|A|2736
7UVW|1|A|A|2737
7UVW|1|A|C|2738
*
7UVW|1|A|G|2758
7UVW|1|A|G|2759
7UVW|1|A|A|2760
7UVW|1|A|A|2761
7UVW|1|A|G|2762
7UVW|1|A|C|2763

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L36

Chain G

50S ribosomal protein L6

Chain I

50S ribosomal protein L13