IL_7UVW_102

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

CUAAAG*CGUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UVW_102 not in the Motif Atlas

Homologous match to IL_5J7L_351

Geometric discrepancy: 0.1368

The information below is about IL_5J7L_351

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_29471.1

Basepair signature

cWW-cWW-L-tHS-L-cWW

Number of instances in this motif group

1

Unit IDs

7UVW|1|A|C|2802
7UVW|1|A|U|2803
7UVW|1|A|A|2804
7UVW|1|A|A|2805
7UVW|1|A|A|2806
7UVW|1|A|G|2807
*
7UVW|1|A|C|2885
7UVW|1|A|G|2886
7UVW|1|A|U|2887
7UVW|1|A|G|2888

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain Z

50S ribosomal protein L32