IL_7UVY_023

3D structure

PDB id

7UVY (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

GGG*UAAUC

Length

8 nucleotides

Bulged bases

7UVY|1|A|G|774, 7UVY|1|A|A|786, 7UVY|1|A|A|787

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UVY_023 not in the Motif Atlas

Homologous match to IL_7RQB_023

Geometric discrepancy: 0.1222

The information below is about IL_7RQB_023

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_90991.6

Basepair signature

cWW-cWW

Number of instances in this motif group

7

Unit IDs

7UVY|1|A|G|773
7UVY|1|A|G|774
7UVY|1|A|G|775
*
7UVY|1|A|U|785
7UVY|1|A|A|786
7UVY|1|A|A|787
7UVY|1|A|U|788
7UVY|1|A|C|789

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L34

Chain C

50S ribosomal protein L2

Chain R

50S ribosomal protein L22