IL_7UVY_036

3D structure

PDB id

7UVY (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

UUAAGUG*CUAAAA

Length

13 nucleotides

Bulged bases

7UVY|1|A|A|1139, 7UVY|1|A|A|1141

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UVY_036 not in the Motif Atlas

Geometric match to IL_7RQB_039

Geometric discrepancy: 0.0549

The information below is about IL_7RQB_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_57188.3

Basepair signature

cWW-cSH-tWW-L-tWW-cWW-cSH

Number of instances in this motif group

5

Unit IDs

7UVY|1|A|U|1015
7UVY|1|A|U|1016
7UVY|1|A|A|1017
7UVY|1|A|A|1018
7UVY|1|A|G|1019
7UVY|1|A|U|1020
7UVY|1|A|G|1021
*
7UVY|1|A|C|1137
7UVY|1|A|U|1138
7UVY|1|A|A|1139
7UVY|1|A|A|1140
7UVY|1|A|A|1141
7UVY|1|A|A|1142

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L36

Chain I

50S ribosomal protein L13