IL_7UVZ_068

3D structure

PDB id

7UVZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GAAG*CC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UVZ_068 not in the Motif Atlas

Geometric match to IL_9E6Q_011

Geometric discrepancy: 0.3245

The information below is about IL_9E6Q_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_94991.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

17

Unit IDs

7UVZ|1|A|G|1842
7UVZ|1|A|A|1843
7UVZ|1|A|A|1844
7UVZ|1|A|G|1845
*
7UVZ|1|A|C|1889
7UVZ|1|A|C|1890

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain a

Small subunit ribosomal RNA; SSU rRNA

Chain v

Transfer RNA; tRNA