IL_7UVZ_176

3D structure

PDB id

7UVZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

UAG*CG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UVZ_176 not in the Motif Atlas

Geometric match to IL_7A0S_084

Geometric discrepancy: 0.3009

The information below is about IL_7A0S_084

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_48076.8

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

43

Unit IDs

7UVZ|1|a|U|1437
7UVZ|1|a|A|1438
7UVZ|1|a|G|1439
*
7UVZ|1|a|C|1457
7UVZ|1|a|G|1458

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain O

50S ribosomal protein L19

Chain t

30S ribosomal protein S20