IL_7UW1_065
3D structure
- PDB id
- 7UW1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii 70S ribosome-Streptothricin-D complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- UGCAAAC*GGACGUAUA
- Length
- 16 nucleotides
- Bulged bases
- 7UW1|1|A|A|1797, 7UW1|1|A|C|1812, 7UW1|1|A|U|1816
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UW1_065 not in the Motif Atlas
- Homologous match to IL_7RQB_070
- Geometric discrepancy: 0.0717
- The information below is about IL_7RQB_070
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_17069.3
- Basepair signature
- cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7UW1|1|A|U|1794
7UW1|1|A|G|1795
7UW1|1|A|C|1796
7UW1|1|A|A|1797
7UW1|1|A|A|1798
7UW1|1|A|A|1799
7UW1|1|A|C|1800
*
7UW1|1|A|G|1809
7UW1|1|A|G|1810
7UW1|1|A|A|1811
7UW1|1|A|C|1812
7UW1|1|A|G|1813
7UW1|1|A|U|1814
7UW1|1|A|A|1815
7UW1|1|A|U|1816
7UW1|1|A|A|1817
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: