IL_7UW1_128

3D structure

PDB id

7UW1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii 70S ribosome-Streptothricin-D complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

UGAAGAAG*UGUAAAG

Length

15 nucleotides

Bulged bases

7UW1|1|a|A|408

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UW1_128 not in the Motif Atlas

Homologous match to IL_4LFB_017

Geometric discrepancy: 0.1617

The information below is about IL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_62329.1

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

7UW1|1|a|U|405
7UW1|1|a|G|406
7UW1|1|a|A|407
7UW1|1|a|A|408
7UW1|1|a|G|409
7UW1|1|a|A|410
7UW1|1|a|A|411
7UW1|1|a|G|412
*
7UW1|1|a|U|423
7UW1|1|a|G|424
7UW1|1|a|U|425
7UW1|1|a|A|426
7UW1|1|a|A|427
7UW1|1|a|A|428
7UW1|1|a|G|429

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain d

30S ribosomal protein S4