IL_7UW1_130

3D structure

PDB id

7UW1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii 70S ribosome-Streptothricin-D complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GGAGG*CGUUAC

Length

11 nucleotides

Bulged bases

7UW1|1|a|U|482

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UW1_130 not in the Motif Atlas

Geometric match to IL_5J7L_022

Geometric discrepancy: 0.0552

The information below is about IL_5J7L_022

Detailed Annotation

tSH-tHW-tWW

Broad Annotation

No text annotation

Motif group

IL_88269.4

Basepair signature

cWW-tWW-cSH-tWH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7UW1|1|a|G|442
7UW1|1|a|G|443
7UW1|1|a|A|444
7UW1|1|a|G|445
7UW1|1|a|G|446
*
7UW1|1|a|C|480
7UW1|1|a|G|481
7UW1|1|a|U|482
7UW1|1|a|U|483
7UW1|1|a|A|484
7UW1|1|a|C|485

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain p

30S ribosomal protein S16