IL_7V08_045
3D structure
- PDB id
- 7V08 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.36 Å
Loop
- Sequence
- GACACCACAAAA*UGAAAAUGGAUGGCGC
- Length
- 28 nucleotides
- Bulged bases
- 7V08|1|1|C|1198, 7V08|1|1|A|1204
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7V08|1|1|G|1194
7V08|1|1|A|1195
7V08|1|1|C|1196
7V08|1|1|A|1197
7V08|1|1|C|1198
7V08|1|1|C|1199
7V08|1|1|A|1200
7V08|1|1|C|1201
7V08|1|1|A|1202
7V08|1|1|A|1203
7V08|1|1|A|1204
7V08|1|1|A|1205
*
7V08|1|1|U|1299
7V08|1|1|G|1300
7V08|1|1|A|1301
7V08|1|1|A|1302
7V08|1|1|A|1303
7V08|1|1|A|1304
7V08|1|1|U|1305
7V08|1|1|G|1306
7V08|1|1|G|1307
7V08|1|1|A|1308
7V08|1|1|U|1309
7V08|1|1|G|1310
7V08|1|1|G|1311
7V08|1|1|C|1312
7V08|1|1|G|1313
7V08|1|1|C|1314
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain O
- 60S ribosomal protein L16-A
- Chain b
- Nucleolar GTP-binding protein 1
- Chain f
- 60S ribosomal protein L33-A
- Chain r
- Ribosome biogenesis protein NSA2
- Chain s
- Nuclear GTP-binding protein NUG1
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