IL_7V2L_024
3D structure
- PDB id
- 7V2L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophilus 30S ribosome with KsgA, class K1k2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GU*AUAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7V2L_024 not in the Motif Atlas
- Homologous match to IL_5J7L_029
- Geometric discrepancy: 0.1065
- The information below is about IL_5J7L_029
- Detailed Annotation
- Major groove minor groove platform; mini C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_68140.4
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 18
Unit IDs
7V2L|1|A|G|581
7V2L|1|A|U|582
*
7V2L|1|A|A|624
7V2L|1|A|U|625
7V2L|1|A|A|626
7V2L|1|A|C|627
Current chains
- Chain A
- 16s ribosomal RNA
Nearby chains
- Chain H
- 30S ribosomal protein S8
- Chain Q
- 30S ribosomal protein S17
Coloring options: