IL_7V2L_051

3D structure

PDB id

7V2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophilus 30S ribosome with KsgA, class K1k2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

7V2L|1|A|C|1383, 7V2L|1|A|A|1481

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7V2L_051 not in the Motif Atlas

Homologous match to IL_6CZR_165

Geometric discrepancy: 0.1503

The information below is about IL_6CZR_165

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

7V2L|1|A|C|1382
7V2L|1|A|C|1383
7V2L|1|A|G|1384
*
7V2L|1|A|C|1479
7V2L|1|A|A|1480
7V2L|1|A|A|1481
7V2L|1|A|G|1482

Current chains

Chain A

16s ribosomal RNA

Nearby chains