IL_7V2L_061

3D structure

PDB id

7V2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophilus 30S ribosome with KsgA, class K1k2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GCCAUGGGAGCG*CGUGACUGGGGC

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7V2L|1|A|G|1393
7V2L|1|A|C|1394
7V2L|1|A|C|1395
7V2L|1|A|A|1396
7V2L|1|A|U|1397
7V2L|1|A|G|1398
7V2L|1|A|G|1399
7V2L|1|A|G|1400
7V2L|1|A|A|1401
7V2L|1|A|G|1402
7V2L|1|A|C|1403
7V2L|1|A|G|1404
*
7V2L|1|A|C|1457
7V2L|1|A|G|1458
7V2L|1|A|U|1459
7V2L|1|A|G|1460
7V2L|1|A|A|1461
7V2L|1|A|C|1462
7V2L|1|A|U|1463
7V2L|1|A|G|1464
7V2L|1|A|G|1465
7V2L|1|A|G|1466
7V2L|1|A|G|1467
7V2L|1|A|C|1468

Current chains

Chain A

16s ribosomal RNA

Nearby chains

Chain L

30S ribosomal protein S12