IL_7V2M_016
3D structure
- PDB id
- 7V2M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophilus 30S ribosome with KsgA, class K1k4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGAAGAAG*UGUAAAC
- Length
- 15 nucleotides
- Bulged bases
- 7V2M|1|A|A|408
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7V2M_016 not in the Motif Atlas
- Homologous match to IL_4LFB_017
- Geometric discrepancy: 0.1276
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28026.3
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
7V2M|1|A|G|405
7V2M|1|A|G|406
7V2M|1|A|A|407
7V2M|1|A|A|408
7V2M|1|A|G|409
7V2M|1|A|A|410
7V2M|1|A|A|411
7V2M|1|A|G|412
*
7V2M|1|A|U|423
7V2M|1|A|G|424
7V2M|1|A|U|425
7V2M|1|A|A|426
7V2M|1|A|A|427
7V2M|1|A|A|428
7V2M|1|A|C|429
Current chains
- Chain A
- 16s ribosomal RNA
Nearby chains
- Chain D
- 30S ribosomal protein S4
- Chain W
- Ribosomal RNA small subunit methyltransferase A
Coloring options: