IL_7V2M_039
3D structure
- PDB id
- 7V2M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophilus 30S ribosome with KsgA, class K1k4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CGG*CUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7V2M_039 not in the Motif Atlas
- Geometric match to IL_5TBW_047
- Geometric discrepancy: 0.1829
- The information below is about IL_5TBW_047
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
7V2M|1|A|C|987
7V2M|1|A|G|988
7V2M|1|A|G|989
*
7V2M|1|A|C|998
7V2M|1|A|U|999
7V2M|1|A|G|1000
Current chains
- Chain A
- 16s ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: