IL_7V2M_057

3D structure

PDB id

7V2M (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophilus 30S ribosome with KsgA, class K1k4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUC*GCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7V2M_057 not in the Motif Atlas

Geometric match to IL_6CZR_171

Geometric discrepancy: 0.1311

The information below is about IL_6CZR_171

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

183

Unit IDs

7V2M|1|A|G|1418
7V2M|1|A|U|1419
7V2M|1|A|C|1420
*
7V2M|1|A|G|1442
7V2M|1|A|C|1443
7V2M|1|A|C|1444

Current chains

Chain A

16s ribosomal RNA

Nearby chains

Chain T

30S ribosomal protein S20