IL_7V2M_061

3D structure

PDB id

7V2M (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophilus 30S ribosome with KsgA, class K1k4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAGUAGC*GCGCAGAUAC

Length

17 nucleotides

Bulged bases

7V2M|1|A|A|686

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7V2M|1|A|G|667
7V2M|1|A|A|668
7V2M|1|A|G|669
7V2M|1|A|U|670
7V2M|1|A|A|671
7V2M|1|A|G|672
7V2M|1|A|C|673
*
7V2M|1|A|G|682
7V2M|1|A|C|683
7V2M|1|A|G|684
7V2M|1|A|C|685
7V2M|1|A|A|686
7V2M|1|A|G|687
7V2M|1|A|A|688
7V2M|1|A|U|689
7V2M|1|A|A|690
7V2M|1|A|C|691

Current chains

Chain A

16s ribosomal RNA

Nearby chains

Chain K

30S ribosomal protein S11