3D structure

PDB id
7V2N (explore in PDB, NAKB, or RNA 3D Hub)
Description
T.thermophilus 30S ribosome with KsgA, class K2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
CGGGACGAAACC*GACUGACGGUACCG
Length
26 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7V2N|1|A|C|439
7V2N|1|A|G|440
7V2N|1|A|G|441
7V2N|1|A|G|442
7V2N|1|A|A|443
7V2N|1|A|C|444
7V2N|1|A|G|445
7V2N|1|A|A|446
7V2N|1|A|A|447
7V2N|1|A|A|448
7V2N|1|A|C|449
7V2N|1|A|C|450
*
7V2N|1|A|G|462
7V2N|1|A|A|463
7V2N|1|A|C|464
7V2N|1|A|U|465
7V2N|1|A|G|466
7V2N|1|A|A|467
7V2N|1|A|C|468
7V2N|1|A|G|469
7V2N|1|A|G|470
7V2N|1|A|U|471
7V2N|1|A|A|472
7V2N|1|A|C|473
7V2N|1|A|C|474
7V2N|1|A|G|475

Current chains

Chain A
16s ribosomal RNA

Nearby chains

Chain D
30S ribosomal protein S4
Chain P
30S ribosomal protein S16

Coloring options:

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